A B C D E F G H I J K L M N O P Q R S T U V W Z

D

DAC - Class in peakml.io.dac

Implementation of a 1-to-1 mapping of the Waters Datafile Access Component.

DAC() - Constructor for class peakml.io.dac.DAC

DACCalibrationInfo - Class in peakml.io.dac

Collection of values of the calibration used for the data.

DACCalibrationInfo() - Constructor for class peakml.io.dac.DACCalibrationInfo

DACCalibrationInfo.DynamicParams - Class in peakml.io.dac

DACCalibrationInfo.DynamicParams(String) - Constructor for class peakml.io.dac.DACCalibrationInfo.DynamicParams

DACCalibrationInfo.FastParams - Class in peakml.io.dac

DACCalibrationInfo.FastParams(String) - Constructor for class peakml.io.dac.DACCalibrationInfo.FastParams

DACCalibrationInfo.StaticFunction - Class in peakml.io.dac

DACCalibrationInfo.StaticFunction(String) - Constructor for class peakml.io.dac.DACCalibrationInfo.StaticFunction

DACCalibrationInfo.StaticParams - Class in peakml.io.dac

DACCalibrationInfo.StaticParams(String) - Constructor for class peakml.io.dac.DACCalibrationInfo.StaticParams

DACExperimentInfo - Class in peakml.io.dac

Collection of parameters and other information on the experiment.

DACExperimentInfo() - Constructor for class peakml.io.dac.DACExperimentInfo

DACExperimentInfo.ExFunctionInfo - Class in peakml.io.dac

DACExperimentInfo.ExFunctionInfo() - Constructor for class peakml.io.dac.DACExperimentInfo.ExFunctionInfo

DACExScanStats - Class in peakml.io.dac

DACExScanStats() - Constructor for class peakml.io.dac.DACExScanStats

DACFunctionInfo - Class in peakml.io.dac

DACFunctionInfo() - Constructor for class peakml.io.dac.DACFunctionInfo

DACHeader - Class in peakml.io.dac

Collection of all the header information stored in a MassLynx raw data file.

DACHeader() - Constructor for class peakml.io.dac.DACHeader

DACParser - Class in peakml.io.dac

DACParser() - Constructor for class peakml.io.dac.DACParser

DACProcessInfo - Class in peakml.io.dac

DACProcessInfo() - Constructor for class peakml.io.dac.DACProcessInfo

DACScanStats - Class in peakml.io.dac

DACScanStats() - Constructor for class peakml.io.dac.DACScanStats

DACSpectrum - Class in peakml.io.dac

DACSpectrum() - Constructor for class peakml.io.dac.DACSpectrum

dalton - Static variable in class peakml.chemistry.PeriodicTable

The precise value of one dalton.

DataFrame - Class in peakml.math

Convenience implementation of an R-like data-frame, which is essentially a matrix with named rows and columns.

DataFrame.Double - Class in peakml.math

Implementation of the data-frame with the double data-type.

DataFrame.Double(int, int) - Constructor for class peakml.math.DataFrame.Double

Constructs a new data-frame with the given number of rows and columns.

DataTypes - Class in peakml.util

Utility class, providing a standard interface for dealing with standard data types.

DataTypes() - Constructor for class peakml.util.DataTypes

DECODE - Static variable in class peakml.util.Base64

Specify decoding.

decode(byte[], int, int, int) - Static method in class peakml.util.Base64

Very low-level access to decoding ASCII characters in the form of a byte array.

decode(String) - Static method in class peakml.util.Base64

Decodes data from Base64 notation, automatically detecting gzip-compressed data and decompressing it.

decode(String, int) - Static method in class peakml.util.Base64

Decodes data from Base64 notation, automatically detecting gzip-compressed data and decompressing it.

decodeFileToFile(String, String) - Static method in class peakml.util.Base64

Reads infile and decodes it to outfile.

decodeFromFile(String) - Static method in class peakml.util.Base64

Convenience method for reading a base64-encoded file and decoding it.

decodeToFile(String, String) - Static method in class peakml.util.Base64

Convenience method for decoding data to a file.

decodeToObject(String) - Static method in class peakml.util.Base64

Attempts to decode Base64 data and deserialize a Java Object within.

DEDUCT - Static variable in class peakml.chemistry.PeriodicTable

The derivative can only be a deduct

definition - Variable in class peakml.io.Vocabulary.Term

A free-text description of the term.

DerivativeGraph - Class in peakml.util.swt.widget

DerivativeGraph(Composite, int) - Constructor for class peakml.util.swt.widget.DerivativeGraph

DEUTERIUM - Static variable in class peakml.chemistry.PeriodicTable

The index of the deuterium element in the PeriodicTable.elements array.

dispose() - Method in class peakml.io.xrawfile.IXRawfile

Disposes of the OLE connection.

dispose() - Method in class peakml.util.swt.dialog.ProgressDialog

distance(Type, Type) - Method in interface peakml.IPeak.MatchCompare

The function to implement for the calculation of the distance between two peaks.

DONT_BREAK_LINES - Static variable in class peakml.util.Base64

Don't break lines when encoding (violates strict Base64 specification)

draw(Graphics2D, Rectangle2D, Point2D, PlotState, PlotRenderingInfo) - Method in class peakml.util.jfreechart.FastErrorBarPlot

draw(Graphics2D, Rectangle2D, Point2D, PlotState, PlotRenderingInfo) - Method in class peakml.util.jfreechart.FastSpectrumPlot

draw(Graphics2D, Rectangle2D, Point2D, PlotState, PlotRenderingInfo) - Method in class peakml.util.jfreechart.FastTimePlot

durbinWatson(double[]) - Static method in class peakml.math.Statistical

Simplistic implementation of the Durbin-Watson statistic.

durbinWatsonCERN(double[]) - Static method in class peakml.math.Statistical

This implementation has been taken from http://www.lbl.gov/