A B C D E F G H I J K L M N O P Q R S T U V W Z

W

WAVE - Static variable in class peakml.graphics.Colormap

Wavelet - Class in peakml.math.wavelet

Wavelet() - Constructor for class peakml.math.wavelet.Wavelet

write(OutputStream, Header, ChromatographyMS<Centroid>) - Static method in class peakml.io.mzml.MZMLWriter

write(OutputStream, Header, ChromatographyMS<Centroid>) - Static method in class peakml.io.mzxml.MzXmlWriter

write(Header, Vector<? extends IPeak>, WriterProgressListener, OutputStream, String) - Static method in class peakml.io.peakml.PeakMLWriter

Generic method for writing a set of IPeak elements (the real class unknown).

write(int) - Method in class peakml.util.Base64.OutputStream

Writes the byte to the output stream after converting to/from Base64 notation.

write(byte[], int, int) - Method in class peakml.util.Base64.OutputStream

Calls Base64.OutputStream.write(int) repeatedly until len bytes are written.

write(String) - Method in class peakml.util.rjava.Project

writeAs(int, OutputStream, JFreeChart, int, int) - Static method in class peakml.graphics.JFreeChartTools

General access method, which can be plugged with the filetype to write to.

writeAsPDF(OutputStream, JFreeChart, int, int) - Static method in class peakml.graphics.JFreeChartTools

This method writes the given graph to the output stream in the PDF format.

writeAsPNG(OutputStream, JFreeChart, int, int) - Static method in class peakml.graphics.JFreeChartTools

This method writes the given graph to the output stream in the PNG format.

writeBackgroundIons(Header, Vector<BackgroundIon<? extends Peak>>, WriterProgressListener, OutputStream, String) - Static method in class peakml.io.peakml.PeakMLWriter

Method for writing a set of BackgroundIon peaks to a PeakML file.

writeCentroids(Header, Vector<Centroid>, WriterProgressListener, OutputStream, String) - Static method in class peakml.io.peakml.PeakMLWriter

Method for writing a set of Centroid peaks to a PeakML file.

writeIPeakSets(Header, Vector<IPeakSet<IPeak>>, WriterProgressListener, OutputStream, String) - Static method in class peakml.io.peakml.PeakMLWriter

Method for writing a set of IPeakSet peaks to a PeakML file.

writeMassChromatograms(Header, Vector<MassChromatogram<? extends Peak>>, WriterProgressListener, OutputStream, String) - Static method in class peakml.io.peakml.PeakMLWriter

Method for writing a set of MassChromatogram peaks to a PeakML file.

writeMeasurements(String) - Method in class peakml.util.rjava.Project

writePeaks(Header, Vector<Peak>, WriterProgressListener, OutputStream, String) - Static method in class peakml.io.peakml.PeakMLWriter

Generic method for writing a set of IPeak elements (the real class unknown).

WriterProgressListener - Interface in peakml.io

Interface acting as a progress listener for the writer classes.

writeXml(HashMap<String, Molecule>, OutputStream) - Static method in class peakml.io.chemistry.MoleculeIO