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Packages that use IXRawfileException | |
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peakml.io | |
peakml.io.xrawfile |
Uses of IXRawfileException in peakml.io |
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Methods in peakml.io that throw IXRawfileException | |
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static ParseResult |
ParseResult.parse(java.lang.String filename)
Calls the correct parse function based on the filename extension. |
Uses of IXRawfileException in peakml.io.xrawfile |
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Methods in peakml.io.xrawfile that throw IXRawfileException | |
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void |
IXRawfile.close()
Closes a raw file and frees the associated memory. |
int |
IXRawfile.getControllerType(int index)
Returns the type of the device controller registered at the specified index position in the raw file. |
java.lang.String |
IXRawfile.getCreationDate()
Returns the file creation date in DATE format. |
java.lang.String |
IXRawfile.getCreatorID()
Returns the creator ID. |
IXRawfile.Controller |
IXRawfile.getCurrentController()
Gets the current controller type and number for the raw file. |
double |
IXRawfile.getEndTime()
Gets the start time of the last scan or reading for the current controller. |
java.lang.String |
IXRawfile.getErrorLogItem(int itemnumber)
Returns the specified error log item information and the retention time at which the error occurred. |
java.lang.String |
IXRawfile.getErrorMessage()
Returns the last error message that was recorded by the Thermo OLE DLL. |
java.lang.String |
IXRawfile.getFileName()
Returns the fully qualified path name of an open raw file. |
java.lang.String |
IXRawfile.getFilterForScanNum(int scannumber)
Returns the closest matching run time that corresponds to nScanNumber for the current controller. |
java.lang.String |
IXRawfile.getFilterForScanRT(double retentiontime)
Returns the closest matching run time that corresponds to nScanNumber for the current controller. |
java.lang.String[] |
IXRawfile.getFilters()
Returns the list of unique scan filters for the raw file. |
int |
IXRawfile.getFirstSpectrumNumber()
Gets the first scan or reading number for the current controller. |
double |
IXRawfile.getHighMass()
Gets the highest mass or wavelength recorded for the current controller. |
int |
IXRawfile.getInletID()
Gets the inlet ID number for the current controller. |
java.lang.String |
IXRawfile.getInstChannelLabel(int channelnumber)
Returns the channel label, if available, at the specified index for the current controller. |
java.lang.String |
IXRawfile.getInstFlags()
Returns the experiment flags, if available, for the current controller. |
java.lang.String |
IXRawfile.getInstHardwareVersion()
Returns the current controller hardware or firmware revision information, if available. |
java.lang.String |
IXRawfile.GetInstMethod(int methoditem)
Returns the channel label, if available, at the specified index for the current controller. |
java.lang.String |
IXRawfile.getInstModel()
Returns the instrument model, if available, for the current controller. |
java.lang.String |
IXRawfile.getInstName()
Returns the instrument name, if available, for the current controller. |
int |
IXRawfile.getInstNumChannelLabels()
Returns the number of channel labels specified for the current controller. |
int |
IXRawfile.getInstrumentID()
Gets the instrument ID number for the current controller. |
java.lang.String |
IXRawfile.getInstSerialNumber()
Returns the serial number, if available, for the current controller. |
java.lang.String |
IXRawfile.getInstSoftwareVersion()
Returns the current controller software revision information, if available. |
java.util.Vector<IXRawfile.Label> |
IXRawfile.getLabelData(int scannumber)
This method enables you to read the FT-PROFILE labels of a scan represented by the scanNumber. |
int |
IXRawfile.getLastSpectrumNumber()
Gets the last scan or reading number for the current controller. |
double |
IXRawfile.getLowMass()
Gets the lowest mass or wavelength recorded for the current controller. |
double[] |
IXRawfile.getMassListFromScanNum(int scannumber,
boolean centroid)
Returns the mass list array. |
double |
IXRawfile.getMassResolution()
Gets the mass resolution value recorded for the current controller. |
int |
IXRawfile.getMaxIntensity()
Gets the highest base peak of all the scans for the current controller. |
java.util.Vector<IXRawfile.Noise> |
IXRawfile.getNoiseData(int scannumber)
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int |
IXRawfile.getNumberOfControllers()
Returns the number of registered device controllers in the raw file. |
int |
IXRawfile.getNumberOfControllersOfType(int type)
Returns the number of registered device controllers of a particular type in the raw file. |
int |
IXRawfile.getNumErrorLog()
Gets the number of error log entries recorded for the current controller. |
int |
IXRawfile.getNumInstMethods()
Returns the number of instrument methods contained in the raw file. |
int |
IXRawfile.getNumSpectra()
Gets the number of spectra acquired by the current controller. |
int |
IXRawfile.getNumStatusLog()
Gets the number of status log entries recorded for the current controller. |
int |
IXRawfile.getNumTrailerExtra()
Gets the trailer extra entries recorded for the current controller. |
int |
IXRawfile.getNumTuneData()
Gets the number of tune data entries recorded for the current controller. |
IXRawfile.PrecursorInfo[] |
IXRawfile.getPrecursorInfoFromScanNum(int scannumber)
This function is used to retrieve information about the parent scans of a data dependent MSn scan. |
IXRawfile.ScanHeaderInfo |
IXRawfile.getScanHeaderInfoForScanNum(int scannumber)
For a given scan number, this function returns information from the scan header for the current controller. |
double |
IXRawfile.getStartTime()
Gets the start time of the first scan or reading for the current controller. |
java.util.HashMap<java.lang.String,java.lang.String> |
IXRawfile.getStatusLogForScanNum(int scannumber)
Returns the recorded status log entry labels and values for the current controller. |
java.lang.String[] |
IXRawfile.getStatusLogLabelsForScanNum(int scannumber)
Returns the recorded status log entry labels for the current controller. |
java.lang.String |
IXRawfile.getStatusLogValueForScanNum(int scannumber,
java.lang.String label)
Returns the recorded status log parameter value for the specified status log parameter label for the current controller. |
java.util.HashMap<java.lang.String,java.lang.String> |
IXRawfile.getTrailerExtraForScanNum(int scannumber)
Returns the recorded trailer extra entry labels and values for the current controller. |
java.util.HashMap<java.lang.String,java.lang.String> |
IXRawfile.getTuneData(int segmentnumber)
Returns the recorded tune parameter labels and values for the current controller. |
int |
IXRawfile.getVersionNumber()
Returns the file format version number. |
boolean |
IXRawfile.isCentroidScanForScanNum(int scannumber)
Returns TRUE if the scan specified by nScanNumber is a centroid scan, FALSE if the scan is a profile scan. |
boolean |
IXRawfile.isProfileScanForScanNum(int scannumber)
Returns TRUE if the scan specified by nScanNumber is a profile scan, FALSE if the scan is a centroid scan. |
void |
IXRawfile.open(java.lang.String filename)
Opens a raw file for reading only. |
static ParseResult |
IXRawParser.parse(java.lang.String filename)
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double |
IXRawfile.rtFromScanNum(int scannumber)
Returns the closest matching run time or retention time that corresponds to nScanNumber for the current controller. |
int |
IXRawfile.scanNumFromRT(double retentiontime)
Returns the closest matching scan number that corresponds to dRT for the current controller. |
void |
IXRawfile.setCurrentController(int controllertype,
int controllernumber)
Sets the current controller in the raw file. |
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