Uses of Package
peakml

Packages that use peakml

peakml
peakml.io
peakml.io.dac
peakml.io.mzml
peakml.io.mzxml
peakml.io.peakml
peakml.util.swt.widget

Classes in peakml used by peakml

Annotatable
Base-class for all classes that support annotations.

Annotation
Implementation of a label-value pair.

Annotation.ValueType
This enum defines the different types of annotations that can occur.

Centroid
Implementation of a centroid or data-point in a mass spectrometry spectrum or profile.

IPeak
The base-class for all peak-types defined in the PeakML file format.

IPeak.MatchCompare
This interface defines the setup for the comparison of peaks from two datasets, in order to determine whether they were caused by the same molecule.

IPeak.RelationCompare
This interface defines the setup for comparing the relatedness of two peaks.

IPeakSet
Implementation of a class maintaining a set of peaks.

MassChromatogram.MassCalculator
In order to accommodate for a different calculation of the mass for a mass chromatogram, implement this interface.

Measurement
Binding type for all classes that contain data from a measurement.

Peak
Base-class for a single peak, which can either be a single data-point (Centroid), or a collection of data-points making up the peak (Profile).

PeakData
Implementation of a container for peak-data.

PeakData.PeakFactory
Interface describing a factory for the creation of instances of the generic gPeak type.

Spectrum
Type-binding for a spectrum (a single measurement on a mass spectrometer).

Spectrum.DataFormat
The format (centroid or profile) of the data

Spectrum.Type
The type of data stored in the spectrum.

Classes in peakml used by peakml.io

Annotatable
Base-class for all classes that support annotations.

Measurement
Binding type for all classes that contain data from a measurement.

Classes in peakml used by peakml.io.dac

Spectrum.DataFormat
The format (centroid or profile) of the data

Classes in peakml used by peakml.io.mzml

Centroid
Implementation of a centroid or data-point in a mass spectrometry spectrum or profile.

ChromatographyMS
This class combines the information from a setup combining a chromatograph (LC or GC) with a mass spectrometer.

Classes in peakml used by peakml.io.mzxml

Centroid
Implementation of a centroid or data-point in a mass spectrometry spectrum or profile.

ChromatographyMS
This class combines the information from a setup combining a chromatograph (LC or GC) with a mass spectrometer.

Classes in peakml used by peakml.io.peakml

BackgroundIon
Implementation of a background ion, useable for all types of mass spectrometry (e.g.

Centroid
Implementation of a centroid or data-point in a mass spectrometry spectrum or profile.

IPeak
The base-class for all peak-types defined in the PeakML file format.

IPeakSet
Implementation of a class maintaining a set of peaks.

MassChromatogram
Implementation of a mass chromatogram, usable for LC-MS, GC-MS, or any 2 dimensional mass spectrometry method.

Peak
Base-class for a single peak, which can either be a single data-point (Centroid), or a collection of data-points making up the peak (Profile).

Classes in peakml used by peakml.util.swt.widget

IPeak
The base-class for all peak-types defined in the PeakML file format.