mzmatch.ipeak.util.BreakupRelatedSplits the derivative clusters found by mzmatch.ipeak.sort.RelatedPeaks into separate files. Each file is named with the relation.id found in the annotations. Example(s)
Windows batch-file: SET JAVA=java -cp mzmatch.jar -da -dsa -Xmn1g -Xms1425m -Xmx1425m -Xss128k -XX:+UseParallelGC -XX:ParallelGCThreads=10 REM extract all the mass chromatograms %JAVA% mzmatch.ipeak.ExtractMassChromatograms -v -i related.peakml -o derivatives\References:
Commandline options* | |
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-i <filename> | The input file (in PeakML format), resulting from the tool mzmatch.ipeak.sort.RelatedPeaks. When this option is not set the input is read from the standard input. |
-o <filename> | Specifies the output directory where all the PeakML files are written with the clusters of derivatives. |
-h | When this is set, the help is shown. |
-v | When this is set, the progress is shown on the standard output. |