mzmatch.ipeak.util.ExtractSets {mzmatch.R}R Documentation

mzmatch.ipeak.util.ExtractSets

Description

This tool extracts the entries of the given setnames (stored in the header) from the given PeakML file and stores the result in the output file.

Usage

mzmatch.ipeak.util.ExtractSets(JHeapSize=1425, i, o, setnames, h, v)

Arguments

JHeapSize

Amount of RAM memory in megabytes, which should be reserved by the Java virtual machine. The default value is 1425 megabytes.

i

The input file (in PeakML format). When this option is not set the input is read from the standard input.

o

The output file (in PeakML format). When this option is not set the output is written to the standard output.

setnames

The list of set names to extract.

h

When this is set, the help is shown.

v

When this is set, the progress is shown on the standard output.

Details

This tool extracts the entries of the given setnames (stored in the header) from the given PeakML file and stores the result in the output file.

Value

This function returns no value.

Author(s)

RA Scheltema (r.a.scheltema@rug.nl)

References

0. PeakML/mzMatch - a file format, Java library, R library and tool-chain for mass spectrometry data analysis. In preparation.

See Also

PeakML.xcms.read


[Package mzmatch.R version 2.0-6 Index]